Ecology

Long-term avian population declines, particularly for the avian insectivore guild, are a conservation concern. With widespread and continuing population trends, climate change and its negative effects on avian food resources is a plausible cross-species driver. My goal was to evaluate whether bottom-up trophic effects of climate change could be influencing avian populations. I used a space-for-time approach to assess the influence of snowpack and soil moisture variability on arthropods and subsequent effects on nest survival. In the 2010 and 2011 growing seasons, I sampled arthropods, soil moisture (soil volumetric water content; VWC), snowpack (snow water equivalent; SWE), forest floor depth (L, F, H layers) and soil texture in conifer plantations and mixed deciduous forest in Southern Ontario's Ganaraska Forest (~4, 400 ha). I used additive linear mixed effects models to assess the responses of arthropod groups' (e.g., order or class) relative biomass (g/day) and abundance (count/day) to those variables. Influences for each arthropod group's biomass and abundance were typically in the same direction. Maximum annual SWE significantly positively influenced most arthropod groups and annual relative difference in VWC positively influenced one quarter. In mixed directions, forest type influenced half of the groups and soil texture and forest floor depth each affected less than one quarter. I then used structural equation models to evaluate relationships between SWE, VWC, the biomass of three arthropod functional guilds, and logistic-exposure model calculated daily nest survival rates for American Robin (Turdus migratorius), Eastern Wood-Pewee (Contopus virens), Least Flycatcher (Empidonax minimus), Ovenbird (Seiurus aurocapilla), and Red-eyed Vireo (Vireo olivaceus). Arthropod guilds included diet-based food, predaceous arthropods and soil-dwelling bioindicators. SWE significantly positively influenced food biomass in all five models and negatively influenced predaceous arthropods in three models. Soil moisture had a mix of positive, negative, and null effects. Eastern Wood-Pewee and Red-eyed Vireo nest survival positively related to food and negatively related to predaceous arthropod biomass. American Robin, Least Flycatcher and Ovenbird nest survival did not appear to be related to arthropod biomasses. Through bottom-up relationships, predicted climate change-induced reductions in snowpack may cause food resource declines and negatively affect some forest breeding bird populations.

Author Keywords: Arthropod biomass, Bottom-up, Forest birds, Nest survival, Path analysis, Precipitation

Lake Huron's food web has experienced drastic changes in response to multiple stressors including declines in offshore productivity, decreased trophic transfer efficiency and a transformation of the benthic food web. However, how these changes have affected the diets and isotopic niches of predatory fish is largely unexplored. My diet study analysed stomach contents from five predatory fish species (lake trout, lake whitefish, chinook salmon, rainbow trout, and walleye) from the Ontario waters of Lake Huron. My isotopic study focused on lake trout and lake whitefish, based on community concerns that recovering lake trout are competing with or consuming lake whitefish. By contrast, I found that lake whitefish were a minimal component of lake trout diets, and the diet and isotopic overlap between these two species was low overall, but varied regionally. Both the dietary and isotope analyses reflect the high regional diversity of energy sources used by predatory fish.

Author Keywords: Food web, Isotopic Niche, Lake Huron, Predator-prey, Regime shift, Regional Energy Sources

This thesis is focused on studying the population dynamics of a predator-prey system in a patchy environment, taking anti-predation responses into consideration. Firstly, we conduct mathematical analysis on the equilibrium solutions of the system. Using techniques from calculus we show that particular steady state solutions exist when the parameters of the system meet certain criteria. We then show that a further set of conditions leads to the local stability of these solutions. The second step is to extend the existing mathematical analysis by way of numerical simulations. We use octave to confirm the previous results, as well as to show that more complicated dynamics can exist, such as stable oscillations. We consider more complex and meaningful functions for nonlinear dispersal between patches and nonlinear predation, and show that the proposed model exhibits behaviours we expect to see in a population model.

Author Keywords: Anti-predation response, Asymptotic stability, Dispersal, Patch model, Population dynamics, Predator-prey

Lake whitefish (Coregonus clupeaformis) are ecologically, economically, and culturally significant across their range, yet little is documented about the species' spawning behaviour. Recruitment of lake whitefish has dramatically declined over the past two decades across many regions of the Laurentian Great Lakes, most notably in lakes Huron and Michigan, prompting research efforts to fill critical knowledge gaps in the life history of this species. Understanding the reproductive ecology of lake whitefish, including documenting aspects of spawning behaviour, may reveal clues about factors contributing to the declines. This study used fine-scale acoustic telemetry to characterize sex-specific movement patterns and habitat associations of lake whitefish during the spawning season. A VEMCO Positioning System (VPS) was deployed at an active spawning shoal in Georgian Bay (Lake Huron), with guidance provided by Saugeen Ojibway Nation members with local ecological knowledge about the shoal and the lake whitefish population. In the fall of 2020, 50 lake whitefish were captured and tagged at the spawning shoal; 28 of those fish were observed the following spawning season in 2021. A clear increase and decrease was observed in the presence of individuals in the study area over the spawning period. Both sexes moved into shallower waters at night and deeper waters during the day at rates of 0.162 m/h and 0.08 m/h, respectively. Decreased rates of movement and horizontal distance travelled were detected during the day leading up to a peak activity phase where 22 fish were present. At night during this peak activity phase, males moved 30.0% faster on average than females (0.204 ± 0.13 and 0.143 ± 0.10 m/s, respectively). This study provided a unique opportunity to work with local First Nations to understand lake whitefish spawning behaviour, providing insights into the reproductive ecology of a population undergoing concerning declines in recruitment and abundance.

Author Keywords: Coregonine restoration, Coregonus clupeaformis, Fine-scale acoustic telemetry, GLATOS, Spawning habitat, Two-Eyed Seeing

The Great Lakes represent nearly a fifth of the global freshwater surface supply, and support culturally, economically, and ecologically important fish species such as Walleye (Sander vitreus). With water temperatures projected to rise by several degrees in the coming century, understanding the energetic impacts on fishes is crucial for effective habitat and fisheries management. I measured the swimming performance, accelerometer-based activity, and metabolism of walleye in relation to body size, sex, and water temperature to assess potential responses to climate variability. Both acceleration and swim speed predicted metabolic rate with reasonable accuracy. Temperature had a positive effect on oxygen consumption whereas body mass had a negative effect. Critical swimming speed increased with temperature, and tailbeat frequency had positive relationships with swim speed and acceleration. My laboratory-based calibrations should enable remote field monitoring of energy use of walleye (via accelerometers) and help conserve an important species through bioenergetic modelling.

Author Keywords: accelerometry, bioenergetics, climate change, metabolism, respirometry, walleye

Acoustic communication is vital for mediating interactions between individuals and their environment. From echolocating bats to isolated rodent pups, ultrasonic vocalizations are a useful mechanism for producing localized and cryptic acoustic signals. Flying squirrels have been demonstrated to produce almost exclusively ultrasonic calls which is rare in both squirrels and mammals, though the significance of this acoustic range is unknown. To investigate the context of ultrasonic calls in these gliding mammals, I created phylogenetic comparative analyses to compare ecological and morphological traits against call frequencies. I found that nocturnality, a trait entangled with gliding in squirrels, was related to higher-frequency calls. Furthermore, by comparing all gliding mammals and their non-gliding counterparts, I found that gliding mammals produce significantly higher frequencies than these relatives. This form of cryptic communication is likely used to avoid predation, which was further supported by behavioural experiments wherein flying squirrels used significantly higher frequencies when predation risk increased. While high frequency communication was used by most gliders, I found that ultraviolet-induced photoluminescence, another potential form of crypsis, was strongly associated with nocturnality, with half of the tested gliding mammals showing evidence of this unique colouration. While ultrasonic vocalizations are widespread in echolocating bats and echonavigating mammals, I did not find evidence to support echonavigation in flying squirrels. Instead, I found that ultrasonic vocalizations are used in a variety of social contexts and during solitary foraging and exploration. These combined results demonstrate the unique ecological and evolutionary pressures acting on small-bodied, nocturnal gliding taxa and the resulting cryptic behaviours and communication.

Author Keywords: communication, flying squirrels, gliding mammals, Sciuridae, ultrasound, ultraviolet-induced photoluminescence

I tracked summer movements and activity of snowshoe hares (Lepus americanus) in southwestern Yukon, Canada, during their population cycle (2015–2022) to assess the primary drivers of movement. Hares exhibited variable movement and activity during the cycle, exhibiting increased home range size and higher daily displacement during low population densities. Males exhibited more dramatic increases in their home ranges (>3-fold), and had greater and more variable movement rates and time spent travelling than females. The ratio of predators to hares was highest at low hare densities when hares were moving most, and seasonal activity of hares seemed unrelated to that of predators. Differences between sexes imply that reproductive activities likely were the main driver of hare movement variation rather than food availability. These findings reinforce that, even in highly variable environments, potential rewards associated with successful mate search and reproduction may outweigh the risks associated with reproductive behaviour.

Author Keywords: behaviour, boreal forest, GPS telemetry, home range, movement ecology, predation risk