Graduate Theses & Dissertations


Larval lake whitefish (Coregonus clupeaformis) recruitment dynamics in Lake Huron
Lake whitefish (Coregonus clupeaformis) recruitment has declined substantially in several regions of the Laurentian Great Lakes since the establishment of non-native dreissenid mussels in the early 1990’s. In Lake Huron, the reasons for the observed recruitment declines are currently unknown and there is limited knowledge about larval life stage. In our study, we determined whether larval hatching and growth rates have changed before and after dreissenid mussel invasion, and the role of several key environmental variables in influencing annual variation in larval densities. Larval fish were collected in the Fishing Islands spawning shoal during two time periods: a historical period (1976-1986) and a contemporary period (2017-2019). Larval densities and growth were lower in recent years, suggesting that recruitment is being limited at the larval life stage and that reduced food availability may be further limiting the growth during the larval stage. Annual variation of larval densities were influenced by spawning stock biomass, water levels, and dreissenid mussel presence, with higher water levels and the presence of dreissenid mussels being associated with higher larval densities. The direction of the effect of spawning stock biomass was either negative or positive depending on the model. We also found that larval density was a significant predictor of age 4 recruitment, indicating that year-class strength may be partly established at the larval life stage. Author Keywords: Coregonus clupeaformis, Great Lakes, Lake Huron, Lake whitefish, Larval, Recruitment
Expression optimization and NMR spectroscopy of Giardia intestinalis cytochrome b5 isotype III
The parasitic protist Giardia intestinalis does not synthesize heme and lacks many common eukaryotic heme proteins, yet it expresses four cytochrome b5 (gCYTB5) isotypes of unknown function. These have low reduction potentials and distinct subcellular locations that are consistent with structural features and biological functions that differ from their mammalian counterparts. Isotype III (gCYTB5-III) is particularly fascinating for its unusual location in the nuclei of Giardia. This thesis reports the optimization of recombinant gCYTB5-III overexpression for structural studies by NMR spectroscopy. Vital optimization factors for isotope labelling were first identified, finding that auto-induction promotes the optimization of many other conditions, such as colony selection, starter cultures, media components, temperature, pH and aeration. Optimized conditions were then applied to the expression and NMR spectroscopy of isotope-labelled gCYTB5-III and bovine cytochrome b5 as a control. These results can be extended to other heme proteins and will expand our biochemical knowledge of Giardia. Author Keywords: Auto-induction, Cytochrome b5, Giardia intestinalis, Isotope Labelling, Nuclear Magnetic Resonance Spectroscopy, Recombinant Protein
Effects of road salt sodium on soil
While previous studies have focused on how road salt affects water quality and vegetation, limited research has characterized road salt distribution through soil and the resulting impacts. The potential for sodium (Na+) to be retained and impact soil physical and chemical properties is likely to vary depending on the soil’s parent material, and more specifically on the extent of base saturation on the cation exchange complex. This thesis contrasted Na+ retention, impacts, and mobility in roadside soils in two different parent materials within southern Ontario. Soils were sampled (pits and deep cores) during fall 2013 and spring 2014 from two sites along highways within base-poor, Precambrian Shield soil and base-rich soil, respectively. Batch experiments were subsequently performed to investigate the influence of parent material and the effect of co-applied Ca2+-enriched grit on the longevity of Na+ retention in soils. Less Na+ is adsorbed upon the co-application of Ca2+, suggesting grit has a protective effect on soil by increasing cation exchange competition. Positive correlations between Na+ and pH, and negative correlations between Na+ and soil organic matter, % clay and base cations within Shield soils suggest that they are more vulnerable to Na+ impacts than calcareous soils due to less cation exchange competition. However, Na+ is more readily released from calcareous roadside soils, suggesting there is greater potential for Na+ transfer to waterways in regions dominated by calcareous soils. Author Keywords: cation exchange, parent material, road salt, sodium retention, urban soil
Psychometric Properties of a Scale Developed from a Three-Factor Model of Social Competency
While existing models of emotional intelligence (EI) generally recognize the importance of social competencies (SC), there is a tendency in the literature to narrow the focus to competencies that pertain to the self. Given the experiential and perceptual differences between self- vs. other-oriented emotional abilities, this is an important limitation of existing EI models and assessment tools. This thesis explores the psychometric properties of a multidimensional model for SC. Chapter 1 describes the evolution of work on SCs in modern psychology and describes the multidimensional model of SC under review. Chapter 2 replicates this model across a variety of samples and explores the model’s construct validity via basic personality and EI constructs. Chapter 3 further explores the predictive validity of the SC measure within a group of project managers and several success and wellness variables. Chapter 4 examines potential applications for the model and suggestions for further research. Author Keywords: emotional intelligence, project management, social competency, work readiness
Understanding Angler Dynamics in a Recreational Lake Trout (Salvelinus namaycush) Fishery in Algonquin Provincial Park Using Long-Term Access Creel Data
In order to effectively manage recreational fisheries, it is important to understand how the resource is being used. In this thesis, long-term creel census data, collected on Lake Opeongo in Algonquin Provincial Park, Ontario, Canada was used to assess fine-scale angler dynamics within a recreational Lake Trout (Salvelinus namaycush) fishery. The spatial distribution of angler reported catch locations of Lake Trout within the lake, was assessed using an Optimized Hotspot Analysis in ArcGIS. Areas of significant clustering of catch locations were revealed during all time periods and varied in size and location both seasonally and temporally. Cormack-Jolly-Seber models were used to evaluate the probability of individual angling boats persisting in the regional fishery and being detected on Lake Opeongo through time, as well as to examine the effect of angler travel distance and gas prices on participation parameters. Time-varying models revealed that the probability of an angler persisting in the fishery varied, while detection estimates remained stable. Travel distance had a negative effect on both parameters while increased gas prices only had a slight negative effect on detection estimates. Additionally, among Lake Opeongo anglers, angling avidity varied as did lake specific fishing experience. Average CUE was found to be higher among angling parties who visited the lake more often than fishing parties who visited relatively few times. Author Keywords:
Moss Biomonitoring of Trace Element Deposition in Northwestern British Columbia, Canada
Atmospheric pollutant deposition poses a risk to ecosystem health; therefore, monitoring the spatial and temporal trends of deposition is integral to environmental sustainability. Although moss biomonitoring is a common method to monitor various pollutants in Europe, offering a cost-effective approach compared to traditional methods of monitoring, it is rarely used in Canada. The focus of this study was a spatial assessment of trace element deposition across a region with a known large-point source of emissions using the moss biomonitoring method. Moss tissues presented strong correlations with modelled deposition in the region, suggesting mosses are a valuable biomonitoring tool of trace element deposition, especially in regions dominated by large-point emission sources. Additionally, a moss species endemic to Canada was compared to commonly used moss species with results indicating this species (Isothecium stoloniferum) can be used reliably as a biomonitor. Moss biomonitoring is recommended as a compliment to fill in spatial gaps in current monitoring networks across the country. Author Keywords: biomonitoring, bryophytes, Hylocomium splendens, moss, Pleurozium schreberi, trace elements
Detecting anti-estrogens and anti-androgens in surface waters impacted by municipal wastewater discharges and agricultural runoff
This study focused on detecting 22 target anti-estrogenic and anti-androgenic compounds in surface waters influenced by both discharges of municipal wastewater and agricultural runoff in Canada and Argentina. Polar organic chemical integrative samplers (POCIS) were used to monitor the target compounds in surface waters. The removals of the target compounds in a municipal wastewater treatment plant (WWTP) in Canada were also evaluated. In both Canada and Argentina pesticides with potential anti-estrogenic and anti-androgenic activities were detected in the surface waters. The highest concentrations were found in Argentina (up to 1010 ng L-1) in areas impacted by heavy agricultural practices. Cyproterone acetate and bicalutamide were the only two anti-cancer drugs detected only at the Canadian study site, the Speed River, ON. In the Guelph WWTP, that discharges into the Speed River, these target compounds were not all efficiently removed (>70%) during treatment. Overall, this study provides insight to possible anti-estrogenic and anti-androgenic compounds that may be contributing to endocrine disrupting activities in surface waters. Author Keywords: Anti-androgens, Anti-estrogens, Cancer Therapy Drugs, Current use pesticides, Pharmaceuticals and Personal Care Products, Polar Organic Chemical Integrative Samplers
Assessing basin storage
Water storage is a fundamental component of drainage basins, controlling the synchronization between precipitation input and streamflow output. The ability of a drainage basin to store water and regulate streamflow may mediate sensitivity to climate and land cover change. There is currently no agreement on the best way to quantify basin storage. This study compares results of a combined hydrometric and isotopic approach for characterizing inter-basin differences in storage across the Oak Ridges Moraine (ORM) in southern Ontario. The ratio of the standard deviation of the stable isotope signature of streamflow relative to that of precipitation has been shown to be inversely proportional to mean water transit times, with smaller ratios indicating longer water transit times and implying greater storage. Stable isotope standard deviation ratios were inversely related to baseflow index values. Basins demonstrating longer transit times were associated with hydrological characteristics that promote infiltration and recharge of storage. Author Keywords: baseflow, basin storage, climate change, mean transit time, Oak Ridges Moraine, stable isotopes
Temperature effects on the routine metabolic rates of brook trout (Salvelinus fontinalis) eggs, alevin and fry
Early developmental stages of cold-adapted ectotherms such as brook trout (Salvelinus fontinalis) are at risk of mortality with increasing water temperatures because of their sensitivity to changes in their environment. I studied the mass and routine metabolic rate (RMR) of wild-origin brook trout eggs, alevin and young fry reared at normal (5°C) and elevated (9°C) temperatures for the duration of the study or at mismatched temperatures. This setup determined if preconditioning acclimation for one temperature benefits or hinders the organism later in life. Three levels of biological organization (ancestry, population, family) were studied using Akaike’s Information Criterion (AIC) to identify models that best accounted for variation in the data. Family, mass and temperature were most important in predicting body mass and mass-adjusted RMR, although population and ancestral-level differences were also detected at some life stages. Strong variation in body mass and mass-adjusted RMR among families may indicate adaptive potential within brook trout populations to respond to increases in water temperature with climate change. Author Keywords: Acclimation, AIC, Brook trout (Salvelinus fontinalis), Environmental matching, Routine metabolic rate, Temperature
Assessing the environmental correlates of a lethal amphibian pathogen, Batrachochytrium dendrobatidis, in Ontario wetlands
Many emerging infectious diseases are caused by pathogens that possess free-living life stages, in which they interact with the environment directly rather than through the mediation of a host. These diseases represent major impediments to wildlife conservation; however, the dynamics of their interaction with the environment are poorly studied, often due to the difficulty of detecting these microscopic pathogens in environmental samples. One of these pathogens is Batrachochytrium dendrobatidis (Bd), a fungus that has been linked to declines in many amphibian species. In this thesis I use an emerging technique, environmental DNA detection (eDNA), to detect and quantify Bd in the water of southern Ontario (Canada) wetlands and examine its correlation with a variety of aspects of water quality, surrounding habitat, and seasonal timing. My purpose was to inform not only on potential environment-pathogen dynamics for Bd in northern environments, but to provide insight into the use of eDNA as a disease surveillance tool. I found that not only was there high geographic variation in Bd detection and intensity, but also high temporal variation within the same site on time scales as low as two weeks. While Bd prevalence was not strongly correlated with any of the variables tested, intensity showed strong correlation with canopy cover, with greater canopy cover over a waterbody correlating to lower Bd intensity. My results present several promising avenues for further examination of Bd in northern ecosystems, and indicate that, while caution is warranted in its implementation, eDNA may become an important tool in amphibian pathogen surveillance. Author Keywords: amphibian disease, Batrachochytrium dendrobatidis, disease monitoring, environment-pathogen dynamics, environmental DNA, wildlife disease
Practicing and Rewarding Task-Relevant Motor Variability to Optimize Motor Performance
It is universally accepted that human motor performance is variable in both its timing and spatial qualities. However, it is unclear to what extent motor variability impedes performance when learning a new skill and to what extent it enables our ability to learn. The first experiment examined whether performance during a test task depended on whether participants practiced to constrain or vary the task-relevant parameter. Participants used their right hand to make simple point-to-point movements. Results demonstrated the importance of paying attention to test task demands to evaluate which form of practice is most beneficial. The second experiment examined whether levels of variability could be manipulated using a reward-based paradigm to enhance learning when adapting to a perturbation of a simple visually-guided reaching movement. A reward-based feedback task was designed to encourage exploration along the task-relevant dimension, specifically movement direction variability. Overall, I did not find any significant results. Author Keywords: Adaptation, Motor Control, Motor Learning, Reaching
Using environmental DNA (eDNA) metabarcoding to assess aquatic plant communities
Environmental DNA (eDNA) metabarcoding targets sequences with interspecific variation that can be amplified using universal primers allowing simultaneous detection of multiple species from environmental samples. I developed novel primers for three barcodes commonly used to identify plant species, and compared amplification success for aquatic plant DNA against pre-existing primers. Control eDNA samples of 45 plant species showed that species-level identification was highest for novel matK and preexisting ITS2 primers (42% each); remaining primers each identified between 24% and 33% of species. Novel matK, rbcL, and pre-existing ITS2 primers combined identified 88% of aquatic species. The novel matK primers identified the largest number of species from eDNA collected from the Black River, Ontario; 21 aquatic plant species were identified using all primers. This study showed that eDNA metabarcoding allows for simultaneous detection of aquatic plants including invasive species and species-at-risk, thereby providing a biodiversity assessment tool with a variety of applications. Author Keywords: aquatic plants, biodiversity, bioinformatics, environmental DNA (eDNA), high-throughput sequencing, metabarcoding


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