Graduate Theses & Dissertations


Effects of Silver Nanoparticles on Lower Trophic Levels in Aquatic Ecosystems
Due to their effective antibacterial and antifungal properties, silver nanoparticles (AgNPs) have quickly become the most commonly used nanomaterial, with applications in industry, medicine and consumer products. This increased use of AgNPs over the past decade will inevitably result in an elevated release of nanoparticles into the environment, highlighting the importance of assessing the environmental impacts of these nanomaterials on aquatic ecosystems. Although numerous laboratory studies have already reported on the negative effects of AgNPs to freshwater organisms, only a handful of studies have investigated the impacts of environmentally relevant levels of AgNPs on whole communities under natural conditions. This thesis examines the effects of chronic AgNP exposure on natural freshwater littoral microcrustacean, benthic macroinvertebrate and pelagic zooplankton communities. To assess the responses of these communities to AgNPs, I focused on a solely field-based approach, combining a six-week mesocosm study with a three-year whole lake experiment at the IISD – Experimental Lakes Area (Ontario, Canada). Our mesocosm study tested the effects of AgNP concentration (low, medium and high dose), surface coating (citrate- and polyvinylpyrrolidone [PVP]-coated AgNPs), and type of exposure (chronic and pulsed addition) on benthic macroinvertebrates in fine and stony sediments. Relative abundances of metal-tolerant Chironomidae in fine sediments were highest in high dose PVP-AgNP treatments; however, no negative effects of AgNP exposure were seen on biodiversity metrics or overall community structure throughout the study. I observed similar results within the whole lake study that incorporated a long-term addition of low levels of AgNPs to an experimental lake. Mixed-effects models and multivariate methods revealed a decline in all species of the littoral microcrustacean family Chydoridae in the final year of the study within our experimental lake, suggesting that this taxon may be sensitive to AgNP exposure; however, these effects were fairly subtle and were not reflected in the overall composition of littoral communities. No other negative effects of AgNPs were observed on the pelagic zooplankton or benthic macroinvertebrate communities. My results demonstrate that environmentally relevant levels of AgNPs have little impact on natural freshwater microcrustacean and benthic macroinvertebrate communities. Instead, biodiversity metrics and community structure are primarily influenced by seasonal dynamics and nutrient concentrations across both lakes. This thesis highlights the importance of incorporating environmental conditions and the natural variability of communities when examining the potential risks posed by the release of AgNPs into the environment, as simplistic laboratory bioassays may not provide an adequate assessment of the long-term impacts of AgNPs on freshwater systems. Author Keywords: Benthic macroinvertebrates, IISD - Experimental Lakes Area, Littoral microcrustaceans, Silver nanoparticles, Whole lake experiment, Zooplankton
cascading effects of risk in the wild
Predation risk can elicit a range of responses in prey, but to date little is known about breadth of potential responses that may arise under realistic field conditions and how such responses are linked, leaving a fragmented picture of risk-related consequences on individuals. We increased predation risk in free-ranging snowshoe hares (Lepus americanus) during two consecutive summers by simulating natural chases using a model predator (i.e., domestic dog), and monitored hare stress physiology, energy expenditure, behaviour, condition, and habitat use. We show that higher levels of risk elicited marked changes in physiological stress metrics including sustained high levels of free plasma cortisol which had cascading effects on glucose, and immunology, but not condition. Risk-augmented hares also had lowered daily energy expenditure, spent more time foraging, and decreased rest, vigilance, and travel. It is possible that these alterations allowed risk-exposed hares to increase their condition at the same rate as controls. Additionally, risk-augmented hares selected, had high fidelity to, and were more mobile in structurally dense habitat (i.e., shrubs) which provided them additional cover from predators. They also used more open habitat (i.e., conifer) differently based on locale within the home range, using familiar conifer areas within cores for rest while moving through unfamiliar conifer areas in the periphery. Overall, these findings show that prey can have a multi-faceted, highly plastic response in the face of risk and can mitigate the effects of their stress physiology given the right environmental conditions. Author Keywords: behaviour, condition, daily energy expenditure, predator-prey interactions, snowshoe hare, stress physiology
Risk of Mortality for the Semipalmated Plover (Charadrius semipalmatus) Throughout Its Life Cycle
Three long-term mark and recapture/resight data sets of individually marked Semipalmated Plovers (Charadrius semipalmatus) were analyzed using Cormack-Jolly- Seber models. Data came from two breeding populations (Churchill, Manitoba, Canada, n=982, and Egg Island, Alaska, USA, n=84) and one overwintering population (Cumberland Island, Georgia, USA, n=62). For Alaska and Georgia, time-invariant models were best-supported, giving annual survival estimates of 0.67 (95%C.I.: 0.58- 0.76) and 0.59 (95%C.I.: 0.49-0.67) respectively. Data from Manitoba supported a timedependent model: survival estimates varied from 1.00 to 0.36, with lowest estimates from recent years, supporting observations of local population decline. Seasonal survival analysis of the Georgia population indicated lower mortality during winter (monthly Φoverwinter: 0.959, 95%CI: 0.871-0.988; for 6 month period Φoverwinter: 0.780 (0.440-0.929)) than during combined breeding and migratory periods (monthly ΦBreeding+Migration: 0.879 (0.825-0.918); for 8 month ΦBreeding+Migration: 0356 (0.215-0.504)). I recommend, based on high resight rates, continued monitoring of survival of wintering populations, to determine potential range-wide population declines. Keywords: survival, longevity, mortality, shorebird, overwinter, breeding, migration, life cycle Author Keywords: life cycle, longevity, mortality, non-breeding, shorebird, survival
Impact of Agricultural Land Use on Bobolink Occurrence, Abundance, and Reproductive Success in an Alvar Landscape
Pastures and hayfields provide surrogate habitat for many declining grassland birds. Understanding agricultural land use dynamics and habitat quality can impact conservation of grassland species. I investigated 1) patterns of land use change in protected and unprotected sites in relationship to Bobolink occurrence in Carden, Ontario, Canada and 2) whether continuous grazing at lowmoderate cattle densities provided suitable breeding habitat, using both real and artificial nests. I replicated the 2001-2005 Ontario Breeding Bird Atlas to evaluate site habitat changes and Bobolink population trends. In continuously grazed pastures and late-cut hayfields, I monitored Bobolink abundance and reproductive success and modeled daily survival rate of nests using habitat management, vegetation structure, and prey availability. Results indicated that Bobolink have declined by -15.3% since 2001 in Carden; losses were explained almost entirely by changes from suitable breeding habitat (e.g. hayfields) to tilled land or by the colonization of shrubs. For pastures, stocking densities of ≤ 1Animal Units/ha did not negatively impact Bobolink. Year and caterpillar biomass, and vegetation height were the strongest predictors of nesting success in pastures and hayfields, respectively. Focus on the preservation of suitable habitat on the breeding grounds and management on small-scale beef farms can contribute to conservation action for this declining species. Author Keywords: agricultural management, avian ecology, Bobolink, continuous grazing, grassland birds, nest success
Habitat use within and among roosts of chimney swifts (Chaetura pelagica)
Chimney swifts are listed as Threatened nationally and in many provinces within Canada due to rapid population declines. I examined large-scale spatial variation in the maximum size of chimney swift roosts at the northern edge of their range to identify where larger roosts occur. I used multi-sourced data collected across Ontario and Quebec between 1998 and 2013. I found that larger roosts were found at more northerly latitudes, and that very large roosts (>1000 birds) only occurred north of 45°. I also investigated fine-scale patterns of chimney swift positioning inside one of the largest roosts in Ontario. Using digitally recorded images, I calculated the angular position of swifts inside the roost relative to ambient and roost temperature. I found that swifts showed a strong preference for clinging to the south facing wall and clustered more when ambient air temperature was warmer. Thus, huddling in swifts provides additional or alternate benefits, other than serving purely to reduce costs of thermoregulation at low ambient temperatures. This research contributes to the understanding of chimney swift roosting ecology and identifies large roosting sites that should be retained for conservation. Author Keywords: chimney swift, communal roosting, conservation, group size, social thermoregulation, species-at-risk
Island Syndrome and Stress Physiology of Mice in the Genus Peromyscus
Biological differences between island and mainland conspecifics have been well studied, but few studies have addressed differences in stress physiology. Stressors, such as predation and competition for resources, cause the release of glucocorticoids (GCs). Characteristics of island wildlife, called “island syndrome”, are attributed to low levels of predators and competitors. I tested the hypothesis that island syndrome includes differences in GC levels between island and mainland rodents using two approaches; first, using white-footed mice (Peromyscus leucopus) from a near-shore archipelago (Thousand Islands, Ontario) and the nearby mainland; second, using study-skins of deer mice (Peromyscus maniculatus) from two archipelagos offshore of Vancouver Island, British Columbia. White-footed mice in the near-shore archipelago did not show characteristics of island syndrome, or changes in GC levels (feces and hair); however deer mice from both archipelagos in British Columbia were heavier and had lower hair GCs for their size than Vancouver Island mice. Author Keywords: Glucocorticoids, Island rule, Island syndrome, Peromyscus, Stress physiology
Temperature effects on the routine metabolic rates of brook trout (Salvelinus fontinalis) eggs, alevin and fry
Early developmental stages of cold-adapted ectotherms such as brook trout (Salvelinus fontinalis) are at risk of mortality with increasing water temperatures because of their sensitivity to changes in their environment. I studied the mass and routine metabolic rate (RMR) of wild-origin brook trout eggs, alevin and young fry reared at normal (5°C) and elevated (9°C) temperatures for the duration of the study or at mismatched temperatures. This setup determined if preconditioning acclimation for one temperature benefits or hinders the organism later in life. Three levels of biological organization (ancestry, population, family) were studied using Akaike’s Information Criterion (AIC) to identify models that best accounted for variation in the data. Family, mass and temperature were most important in predicting body mass and mass-adjusted RMR, although population and ancestral-level differences were also detected at some life stages. Strong variation in body mass and mass-adjusted RMR among families may indicate adaptive potential within brook trout populations to respond to increases in water temperature with climate change. Author Keywords: Acclimation, AIC, Brook trout (Salvelinus fontinalis), Environmental matching, Routine metabolic rate, Temperature
Stress Axis Function and Regulation in New World Flying Squirrels
Across vertebrate taxa, the hypothalamic-pituitary-adrenal axis (or the stress axis) is highly conserved, and is central to vertebrate survival because it allows appropriate responses to psychological stressors. Habitat shapes successful physiological and ecological strategies, and to appreciate how individual species respond to stressors in their environment, it is essential to have a thorough knowledge of the basic stress physiology of each species. In this dissertation, I studied the functioning and evolution of the stress physiology of New World flying squirrels. I showed that baseline, circulating cortisol levels in northern (Glaucomys sabrinus) and southern (G. volans) flying squirrels are some of the highest ever reported for mammals, indicating that their stress axes operate at a higher set point than most other species. I also assessed other aspects of their acute stress response, including free fatty acid and blood glucose levels, and indices of immune function, and showed that the flying squirrels’ physiological reaction to stressors may differ from that of other mammals. Using immunoblotting, I found that corticosteroid-binding globulin (CBG) expression levels in flying squirrels appeared to be higher than previously reported using alternative methods. I also concluded however, that these levels did not appear to be high enough to provide their tissues with the protective CBG-bound buffer from their high circulating cortisol concentrations experienced by the majority of vertebrates. Thus, this arm of cortisol regulation within the flying squirrel stress axes may be weak or non-existent. Following this, I focused on southern flying squirrels and showed evidence that the second arm of cortisol regulation — the negative feedback mechanism at the level of the brain — functions effectively, but that this species is glucocorticoid resistant. Their tissue receptors appear to have a reduced affinity for cortisol, and this affinity may change seasonally to allow for the onset of other biological processes required for survival and reproduction. Due to their distinctive stress physiology, northern and southern flying squirrels may provide comparative physiologists with model systems for further probing of the function and evolution of the stress axis among vertebrates. Author Keywords: corticosteroid-binding globulin, flying squirrel, Glaucomys, glucocorticoids, physiological ecology, stress physiology
Bank Swallow (Riparia riparia) Breeding in Aggregate Pits and Natural Habitats
I examined Bank Swallow (Riparia riparia) colony persistence and occupancy, in lakeshore, river and man-made aggregate pit habitat. Habitat persistence was highest on the lakeshore and lowest in aggregate pits, likely due to annual removal and relocation of aggregate resources. Bank Swallow colonies in aggregate pit sites were more likely to persist if a colony was larger or if burrows were located higher on the nesting face. I also compared nest productivity and health factors of Bank Swallows in lakeshore and aggregate pit habitats. While clutch size was the same in both habitat types, the number of fledglings from successfully hatched nests was significantly higher in aggregate pit sites than from lakeshore sites. Mass of fledgling Bank Swallows did not differ significantly between habitat types, however mass of adults from aggregate pits decreased significantly over the nesting season. Parasite loads on fledgling Bank Swallows were significantly lower in aggregate pits than in lakeshore sites. According to these indicators, aggregate pits appear to provide equivalent or higher quality habitat for Bank Swallows than the natural lakeshore sites, making them adequate and potentially key for this species’ recovery. Aggregate pit operators can manage for swallows by (1) creating longer, taller faces to attract birds and decrease predation, and (2) supplementing their habitat with water sources to encourage food availability. Author Keywords: Aerial insectivore, aggregate pits, Bank Swallow, colony persistence, ectoparasites, substitute habitat
Pathogen vs. Predator
Stressors are often an inescapable part of an organism’s life. While the effects of many stressors have been well studied individually, potential interactions between stressors exist that may result in greater than additive negative effects. Stressors may be linked by conflicting demands on energy budgets, interfering with important physiological pathways, or necessitating incompatible adaptive responses. Using Ranavirus (FV3) and larval dragonfly predators (Anax spp.) in a 2x2 factorial experiment on green frog (Lithobates clamitans) tadpoles, I investigate the interactions in behaviour, morphology, and metabolism when both stressors were applied in concert. I demonstrate that activity and feeding are reduced additively by both stressors, and tadpoles increase distance between conspecifics in FV3-exposed tanks, but only in the absence of predators. I also note decreases in mass, and a non-significant marginal increase in metabolic rate of tadpoles exposed to FV3. Interestingly, I provide evidence that FV3 can compromise morphometric responses through antagonistic interactions with perceived predation risk exposure, which may result in significantly elevated mortality even when either stressor is present in sub-lethal quantities. Thus, I conclude that sub-lethal exposure to stressors can nonetheless have substantial impacts on organisms and a more integrative approach to examining the impacts of stressors on individual physiology and fitness is necessary. Author Keywords: Behaviour, Interaction, Morphology, Predation Risk, Ranavirus, Tadpoles
Comparing Biological Responses to Contaminants in Darters (Etheostoma spp.) Collected from Rural and Urban Regions of the Grand River Watershed, Ontario
Urban and agricultural activities may introduce chemical stressors, including contaminants of emerging concern (CECs) and current use pesticides (CUPs) into riverine systems. The objective of this study was to determine if fish collected from sites in a river show biomarkers of exposure to these classes of contaminants, and if the biomarker patterns vary in fish collected from urbanized and agricultural sites. The watershed selected for this study was the Grand River in southern Ontario, which transitions from areas dominated by agricultural land use in the north to highly urbanized locations in the southern part of the watershed. Rainbow darters (Etheostoma caerluem) and fantail darters (Etheostoma flabellare) were collected from the Grand River in June, 2014 for biomarker analysis from two urbanized sites and three agricultural sites (n=20 per site). Over the same period of time, Polar Organic Chemical Integrative Samplers (POCIS) were deployed for 2 weeks at each site to monitor for the presence of CUPs and CECs. The amounts of the target compounds accumulated on POCIS, determined using LC-MS/MS were used to estimate the time weighted average concentrations of the contaminants at each site. Data on the liver somatic index for darters indicate site-specific differences in this condition factor (p<0.05). Significant differences in the concentrations of thiobarbituric acid reactive substances (TBARS) in gill tissue (p<0.05) indicate differences in oxidative stress in fish collected from the various sites. Measured concentrations of ethoxyresorufin-O-deethylase (EROD) in liver tissue were significantly different between sites (p<0.05), indicating differences in CYP1A metabolic activity. Finally, acetylcholinesterase (AChE) activity in brain tissue was significantly different between fish from rural and urban sites (p<0.05). The analysis of these biomarkers indicates that fish may be experiencing different levels of biological stress related to different land uses. These data may be useful in developing mitigation strategies to reduce impacts on fish and other aquatic organisms in the watershed. Author Keywords: AChE, Biomarker, Darter, EROD, POCIS, TBARS
effects of parasitism on consumer-driven nutrient recycling
Daphnia are keystone consumers in many pelagic ecosystems because of their central role in nutrient cycling. Daphnia are also frequently infected, and the parasites causing these infections may rival their hosts in their ability to regulate ecosystem processes. Therefore, parasitic exploitation of Daphnia may alter nutrient cycling in pelagic systems. This thesis integrates existing knowledge regarding the exploitation of Daphnia magna by 2 endoparasites to predict parasite-induced changes in the nutrient cycling of infected hosts and ecosystems. In chapter 1, I I contextualizing the integration of these themes by reviewing the development of the fields of elemental stoichiometry and parasitology. In chapter 2, we show how the bacterial parasite, Pasteuria ramosa, increased the nitrogen (N) and phosphorus (P) release rates of D. magna fed P-poor diets. We used a mass-balance nutrient release model to show that parasite-induced changes in host nutrient accumulation rates and diet-specific changes in host ingestion rates were responsible for the accelerated nutrient release rates that we observed. In chapter 3, we extended our examination of the nutrient mass balance of infected D. magna to include another parasite, the microsporidian H. tvaerminnensis. We found differences in the effects of these two parasites on host nutrient use as well as support for the hypothesis that parasite-induced changes in Daphnia N release are caused by the effects of infection on Daphnia fecundity. In chapter 4, we examined the relationship between P concentrations and the presence and prevalence of H. tvaerminnensis in rock pools along the Baltic Sea. We found that particulate P concentrations were negatively associated with the prevalence of this parasite, a result that is consistent with the increase in P sequestration of H. tvaerminnensis-infected Daphnia that we observed in chapter 3. I discuss the potential implications of the work presented in chapters 2-4 for other parasite-host systems and ecosystems in chapter 5. Overall, the research presented here suggests that parasite-induced changes in host nutrient use may affect the availability of nutrients in the surrounding environment, and the magnitude of this effect may be linked to parasite-induced reductions in fecundity for many invertebrate hosts. Author Keywords: consumer, ingestion rates, mass-balance, nutrient-recycling, parasitism, phosphorus


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