Graduate Theses & Dissertations

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wind tunnel and field evaluation of the efficacy of various dust suppressants
A series of experiments was designed to assess the relative efficacy of various dust suppressants to suppress PM10 emissions from nepheline syenite tailings. The experiments were conducted in the Trent University Environmental Wind Tunnel, Peterborough, Ontario, and on the tailings ponds at the Unimin Ltd Nephton mine near Havelock, Ontario. Treated surfaces were subjected to particle-free airflow, abrasion with blown sand particles, particle-free airflow after physical disturbance, and were measured independently using a pin penetrometer. In the particle-free wind tunnel tests, three of the surfaces performed well, and PM10 emissions scaled inversely with crust strength. Light bombardment of each surface by saltating sand grains resulted in PM10 emission rates two orders of magnitude higher. All treated surfaces emitted significantly more PM10 after physical disturbance in both the laboratory and field research. The results suggest that the site conditions, inclusive of the potential for dust advection and resuspension, must be taken into account when considering the use of a commercial dust suppressant. Author Keywords: dust suppression, field testing, mine tailings, wind tunnel experiment
third wheel
Population cycles are regular fluctuations in population densities, however, in recent years many cycles have begun to disappear. With Canada lynx this dampening has also been seen with decreasing latitude corresponding to an increase in prey diversity. My study investigates the role of alternate prey on the stability of the lynx-hare cycle by first comparing the functional responses of two sympatric but ecologically distinct predators on a primary and alternate prey. I then populated a three species predator-prey model to investigate the role of alternate prey on population stability. My results showed that alternate prey can promote stability, though they are unlikely to “stop the cycle”. Furthermore, stability offered by alternate prey is contingent on its ability to increase intraspecific competition. My study highlights that population cycles are not governed by a single factor and that future research needs to be cognizant of interactions between alternate prey and intraspecific competition. Author Keywords: alternate prey, Canis latrans, functional response, Lepus americanus, Lynx canadensis, Tamiasciurus hudsonicus
spatial and temporal distribution of tabanid (Chrysops, Hybomitra and Tabanus) species in the Nakina district of northwestern Ontario
This thesis focused on expanding knowledge of Hybomitra, Chrysops and Tabanus (Diptera: Tabanidae) distributions north of Lake Nipigon, Ontario, in a managed boreal forest. As land use and climate changes accelerate, there is increased pressure to increase knowledge from which to monitor changes. In 2011 and 2012, 8928 individuals representing, 44 species were captured using sweep netting. Major northward range extensions were observed for Chrysops shermani, C. aberrans and Tabanus fairchildi. Smaller range extensions and in-fills were observed for another 15 species. 23 species had exntensions to their previously known seasonal range. C. carbonarius was the only species that showed an extension to both sides of its season. In general, harvested stands had 50% more individuals and 30% greater species richness than younger stands. A possible link between stand age and interspecific competition was identified. Information has been provided to build baseline of species richness, relative abundance and distribution of Tabanid flies. Author Keywords: diptera, distribution, natural history, northern Ontario, species range, tabanid
significance of topographically-focused groundwater recharge during winter and spring on the Oak Ridges Moraine, southern Ontario
The Oak Ridges Moraine (ORM) is a key hydrogeologic feature in southern Ontario. Previous work has emphasized the importance of depression-focused recharge (DFR) for the timing and location of groundwater recharge to the ORM’s aquifers. However, the significance of DFR has not been empirically demonstrated and the relative control of land cover, topography, and surficial geology on DFR is unclear. The potential for DFR was examined for topographic depressions under forested and open, agricultural land covers with similar soils and surficial geology. Recharge (R) was estimated at the crest and base of each depression during the 2012-13 and 2013-14 winter-spring periods (~December – May) using both a 1-dimensional water balance approach and a surface-applied Br- tracer. At each depression, air temperatures, precipitation, snow depth and water equivalent, soil water contents, soil freezing, and depression surface-water levels were monitored and soil properties (texture, bulk density, porosity, and hydraulic conductivity) were measured. Both forested and agricultural land covers experienced soil freezing; however, concrete frost did not develop in the more porous and conductive forest soils. Concrete frost in agricultural depressions resulted in overland flow, episodic ponding and drainage of rain-on-snow and snowmelt inputs. Recharge was an order-of-magnitude greater at the base of open depressions. Observations of ponding (as evidence of DFR) were made at an additional 14 depressions with varying land cover, geometry, and soil type during the 2014 snowmelt period and measurements of pond depth, pond volume, land cover (i.e., percentage of agricultural vs. forested cover), depression geometry (i.e., contributing area, average slope, relief ratio) and soil texture were made. Ponding was restricted to depressions under mostly agricultural cover and a positive, non-linear relationship between pond volume and average slope was shown for sites with similar land cover and soil texture, but neither pond depth nor volume were related to any other depression characteristics. Results suggest that DFR is a significant hydrologic process during winter and spring under agricultural land cover on the ORM. Topographic depressions under agricultural land cover on the ORM crest may serve as critical recharge “hot spots” during winter and spring, and the ability of the unsaturated zone beneath these depressions to modify the chemistry of recharging water deserves further attention. Author Keywords: Concrete frost, Depression-focused groundwater recharge, Oak Ridges Moraine, Ponding, Topographic depressions, Water balance
role of Cln5 in autophagy, using a Dictyostelium discoideum model of Batten disease
This thesis investigated the role of the neuronal ceroid lipofuscinosis protein, Cln5, during autophagy. This was accomplished by performing well-established assays in a Dictyostelium cln5 knockout model (cln5-). In this study, cln5- cells displayed a reduced maximum cell density during growth and impaired cell proliferation in autophagy-stimulating media. cln5- cells had an increased number of autophagic puncta (autophagosomes and lysosomes), suggesting that autophagy is induced when cln5 is absent. cln5- cells displayed increased amounts of ubiquitin-positive proteins but had no change in proteasome protein abundance. During the development of cln5- cells, fruiting bodies developed precociously and cln5- slug size was reduced. Lastly, when cln5- cells were developed on water agar containing ammonium chloride (NH4Cl), a lysosomotropic agent, the formation of multicellular structures was impaired, and the small slug phenotype was exaggerated. In summary, these results indicate that Cln5 plays a role in autophagy in Dictyostelium. The cellular processes that regulate autophagy in Dictyostelium are similar to those that regulate the process in mammalian cells. Thus, this research provides insight into the undefined pathological mechanism of CLN5 disease and could identify cellular pathways for targeted therapeutics. Author Keywords: Autophagy, Batten disease, Cln5, Dictyostelium discoideum, NCL
regional comparison of the structure and function of benthic macroinvertebrate communities within Precambrian Shield and St. Lawrence lowland lakes in south-central Ontario
Benthic macroinvertebrtes (BMI) are functionally important in aquatic ecosystems; as such, knowledge of their community structure and function is critical for understanding these systems. BMI were sampled from ten lakes in each of two regions of south-central Ontario to investigate which chemical and physical variables could be shaping their community structure and function. Ten Precambrian Shield lakes in the Muskoka-Haliburton region, and ten St Lawrence lowland lakes in the Kawartha lakes region were sampled. These lakes are geologically and chemically distinct, creating natural chemical and physical gradients within and between both regions. Community function was assessed using stable isotope analysis to elucidate carbon transfer dynamics (δ13C) and food web interactions (δ15N). It was predicted that the BMI from Shield lakes would have a δ13C signature indicative of allochthonous carbon subsidies, whereas the lowland lake BMI signatures would reflect autochthonous production. Additionally, it was predicted that the food web length (measured in δ15N units) would be different in Shield and lowland lakes. Both of these predictions were supported; however, the data indicate that δ13C signatures are more likely influenced by catchment geology (represented by bicarbonate concentration) than the extent of allochthony. The best predictor of food web length was found to be region. To assess BMI community structure, taxonomic richness, %EPT (% Ephemeroptera, Plecoptera, Trichoptera; a water quality index), and distribution of functional feeding groups were examined. Based on chemistry it was expected that the Shield lakes would be more speciose, and of greater water quality (relatively lower nutrient levels). These predictions were rejected; since there were no significant regional differences in taxonomic richness or biologically inferred water quality (%EPT). However, sediment size was found to best explain the variability in both metrics, with greater richness and %EPT found at sites with medium and small substrates than those with large substrates. Significant regional differences were found in the distribution of functional feeding groups. Most notably, there were significantly greater proportions of scrapers and shredders in the lowland and Shield lakes, respectively. Based on the feeding mechanisms of these invertebrates it can be inferred that allochthonous subsidies are likely of greater importance to Shield lake BMI communities than those of the lowland lakes; supporting the carbon transfer prediction. These findings provide insight about the structure and function of BMI communities from two dominant lake types in Ontario, and could be useful when determining how future chemical and physical changes will impact these communities. Author Keywords: benthic macroinvertebrates, community function, community structure, Precambrian Shield, stable isotopes, St. Lawrence lowlands
origin and ecological function of an ion inducing anti-predator behaviour in Lithobates tadpoles
Chemical cues are used commonly by prey to identify predation risk in aquatic environments. Previous work has indicated that negatively-charged ions of m/z 501 are possibly a kairomone that induces anti-predator responses in tadpoles. This thesis found that this ion species: (i) is produced by injured tadpoles; (ii) exhibits increased spectral intensity with higher tadpole biomass; and (iii) is not produced by starved predators. These results refute the hypothesis that the ion is a kairomone, and rather support its role as an alarm cue released from tadpoles. High resolution mass spectrometry (HR-MS) revealed a unique elemental composition for [M-H]-, m/z 501.2886, of C26H45O7S-. Collision induced dissociation (CID) of ion m/z 501 formed product ions of m/z 97 and m/z 80, HSO4- and SO3-, respectively, indicating the presence of sulfate. Green frog (Lithobates clamitans) tadpoles exposed to m/z 501, and an industrial analogue, sodium dodecyl sulphate (NaC12H25O4S), exhibited similar anti-predator responses, thereby suggesting the potential role of organic sulfate as a tadpole behavioural alterant. Author Keywords: Alarm cue, Amphibian, Chemical Ecology, Mass spectrometry, Predator-prey interactions
multi-faceted approach to evaluating the detection probability of an elusive snake (Sistrurus catenatus)
Many rare and elusive species have low detection probabilities, thereby imposing unique challenges to monitoring and conservation. Here, we assess the detection probability of the Eastern Massasauga (Sistrurus catenatus) in contrast to a more common and conspicuous species, the Eastern Gartersnake (Thamnophis sirtalis). We found that patterns of detection probability differed between species, wherein S. catenatus was detected less often and under a more specific set of sampling conditions. Correspondingly, detection trials with S. catenatus found a high non-detection rate, while detection trials with artificial models suggest that regional differences in detection probability are driven by variation in population density and habitat use. Our results suggest that current monitoring efforts are not sufficient, and that S. catenatus is frequently undetected. Accordingly, we highlight the importance of species-specific monitoring protocols when monitoring rare and elusive species, and recommend a multi-faceted approach that estimates detection probability and identifies species-specific challenges to monitoring. Author Keywords: detection probability, elusive species, monitoring programs, non-detection, S. catenatus, snakes
mechanistic analysis of density dependence in algal population dynamics
Population density regulation is a fundamental principle in ecology, however there remain several unknowns regarding the functional expression of density dependence. One prominent view is that the patterns by which density dependence is expressed are largely fixed across a species, irrespective of environmental conditions. Our study investigated the expression of density dependence in Chlamydomonas reinhartti grown under a gradient of nutrient densities, and hypothesized that the relationship between per capita growth rate (pgr) and population density would vary from concave-up to concave-down as nutrients became less limiting. Contrary to prediction, we found that the relationship between a population's pgr and density became increasingly concave-up as nutrient levels increased. Our results suggest that density dependence is strongly variable depending on exogenous and endogenous processes acting on the population, implying that expression of density regulation depends extensively on local conditions. Population growth suppression may be attributable to environments with high intraspecific competition. Additional work should reveal the mechanisms influencing how the expression of density dependence varies across populations through space and time. Author Keywords: Chlamydomonas reinhartti, density dependence, logistic model, population dynamics, single species growth, theta-logistic equation
influence of tree species litterfall on soil chemistry and implications for modelling soil recovery from acidification
Decades of acidic deposition have depleted base cation pools in soil over large parts of eastern north America, including the Muskoka-Haliburton region of central Ontario. This region has also experienced a shift in forest species composition over the past 200 years, favouring sugar maple (Acer saccharum Marsh.) at the expense of species such as white pine (Pinus strobus L.) and eastern hemlock (Tsuga canadensis (L.) Carr.). This shift in species composition may have changed soil chemistry over time due to differences in nutrient and metal inputs in litterfall. An analysis of litterfall and soil chemistry was conducted for five tree species commonly found across central Ontario. Stands were established in the Haliburton Forest & Wild Life Reserve and were dominated by one of balsam fir (Abies balsamea (L.) Mill.), eastern hemlock, white pine, sugar maple, or yellow birch (Betula alleghaniensis Britt.). Analysis of mineral soil oxides suggested that these stands were established on similar parent material. Deciduous dominated stands (maple and birch) had greater litterfall mass compared with conifer stands (fir, hemlock, and pine), generally leading to greater macronutrient inputs to the soil. Elemental cycling through the organic horizons was more rapid in deciduous stands, with base cations having the shortest residence times. This suggests that a change from greater conifer dominance to mixed hardwood forests may lead to more rapid elemental cycling and alter the distribution of elements in soil. Forests in the region are typically mixed and the resulting differences in soil chemistry may influence model predictions of soil recovery from acidification. Laboratory leaching tests indicated that both stand type and the acidity of simulated rainwater inputs influenced soil solution chemistry, with deciduous stands generally having a greater buffering capacity than sites dominated by coniferous species. Changes in soil chemistry were examined for each stand type using the Very Simple Dynamic (VSD) biogeochemical model. Simulations showed that soil base saturation began to increase following lows reached around the year 2000, and similar patterns were observed for all stands. When sulphur (S) and nitrogen (N) deposition were held constant at present rates, soil base saturation recovery (toward pre-1900 levels) was marginal by 2100. With additional deposition reductions, further increases in base saturation were minor at all sites. In conjunction with additional deposition reductions, the elimination of future forest harvesting allowed for the greatest potential for recovery in all stands. Overall, these results suggest that changes in forest cover may influence soil chemistry over time, most notably in the organic soil horizons. However, forecasted recovery from acidification is expected to follow similar patterns among stands, since differences in soil chemistry were less significant in the mineral soil horizons which compose a greater proportion of the soil profile. Author Keywords: base cation decline, forest harvesting, litterfall, mineral weathering, soil acidification, VSD model
influence of landscape features on the harvest of caribou (Rangifer tarandus) on the island of Newfoundland
Hunting represents the principal tool for managing populations of migratory caribou (Rangifer tarandus), but harvest may be affected by landscape features that govern animal distribution and hunter access. Such effects are unclear. I capitalized on an existing dataset of 21 355 caribou harvest records, 1980 – 2009, to determine the influence of landscape features on caribou harvest across the island of Newfoundland. Using a landcover map and spatial data for anthropogenic features, I modelled caribou harvest at the island scale for three phases of numerical change (growth in the 1980s, cessation of growth in the 1990s, decline in the 2000s) and harvest type (total harvest, resident harvest of males and females, resident harvest of males, resident harvest of females, and non-resident harvest of males) in relation to multiple putative predictor variables: proportion of lichen cover and distances to nearest forest cut, road, outfitter, transmission line, and town. I did the same analysis for seven individual Caribou Management Areas (CMAs). At the island scale, the number of harvested caribou increased with proximity to the nearest forest cut and with greater proportions of lichen habitat. I attribute this to landscape features that provide forage for caribou, but also access and caribou visibility for hunters. Caribou harvest increased in proximity to transmission lines for the harvest of caribou by resident hunters in the 2000s, which could be a result of more risk-prone foraging Newfoundland caribou. Non-resident hunters harvested greater numbers of male caribou further from towns, likely a result of the placement of outfitter camps and activities. At the management area scale, in most instances, more caribou harvest occurred in close proximity to transmission lines. Proximity to forest cuts and high proportions of lichen were still important landscape features leading to a greater harvest. I conclude that the caribou harvest was largely governed by hunter access and visibility of their prey, augmented by open habitats preferred by caribou. KEYWORDS Caribou, Newfoundland, Rangifer tarandus, harvest, hunting, management area, landscape, human disturbances, game species vulnerability. Author Keywords: caribou, game species vulnerability, harvest, hunting, newfoundland, rangifer tarandus
impact of selection harvesting on soil properties and understory vegetation in canopy gaps and skid roads in central Ontario
Tree harvesting alters nutrient cycling and removes nutrients held in biomass, and as a result nutrient availability may be reduced, particularly in naturally oligotrophic ecosystems. Selection harvesting is a silvicultural technique limited to tolerant hardwood forests where individual or small groups of trees are removed creating a “gap” in the forest canopy. In order for harvesting machinery to gain access to these individual trees, trees are felled to create pathways, known as skid roads. The objective of this study was to characterize differences in soil chemical and physical properties in gaps, skid roads and uncut areas following selection harvesting in central Ontario as well as documenting differences in the understory vegetation community and sugar maple (Acer saccharum) seedlings chemical composition post harvest. First year seedlings were collected for elemental analysis from unharvested areas, canopy gaps, and skid roads in 2014, eight months after harvesting. In 2015, first and second year sugar maple seedlings were collected. Soil bulk density and water infiltration were measured in the three areas of the catchment as well as soil moisture, organic matter content, exchangeable base cations, and net nitrification. Seedlings in the disturbed sites had lower concentrations of Mg, K, P, and N compared with unharvested sites and soil nitrification was significantly lower in the skid roads. Water infiltration rates in the gap and skid roads were slower than the control and concentrations of metals (e.g. Fe, Al, Ca) and litter mass increased in litter bags deployed over 335 days, likely reflecting an increase in soil erosion in the skid roads. Understory vegetation was markedly different amongst sites, particularly the dominance of Carex spp. in the skid roads. The sustainability of industrial logging is dependent on successful tree regeneration, however, increased soil compaction, establishment and growth of grasses and shrubs, as well as low nutrient concentrations in seedlings may ultimately restrict forest succession. Author Keywords: Canadian Shield, nitrification, selection harvesting, soil compaction, sugar maple seedling, understory vegetation

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Graduate student theses produced at Trent University. You may also browse theses and dissertations by year, program, or author.

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