Graduate Theses & Dissertations


Carbon Exchange along a Natural Gradient of Deciduous Shrub Coverage in the Low-Arctic
Arctic terrestrial ecosystems have experienced substantial structural and compositional changes in response to warming climate in recent decades, especially the expansion of shrub species in Arctic tundra. Climatic and vegetation changes could feedback to the global climate by changing the carbon balance of Arctic tundra. The objective of this thesis was to investigate the influence of increased shrub coverage on carbon exchange processes between atmosphere and the Arctic tundra ecosystem. In this study a space-for-time substitution was used, referred to as a shrub expansion “chronosequence”, with three sites along a natural gradient of deciduous shrub coverage in the Canadian low Arctic. Leaf-level photosynthetic capacity (Amax) of dominating birch shrub Betula glandulosa (Michx.) was significantly higher (P<0.05) at the site where shrubs were more abundant and taller than at the other sites. For all sites, mean Amax in 2014 was significantly lower than in 2013, in part potentially due to differences in precipitation distribution. Bulk soil respiration (RS) rate was significantly higher (P<0.05) at the site with more shrubs compared with the other sites. The differences in RS across sites appeared to be driven by differences in soil physiochemical properties, such as soil nitrogen and soil bulk density rather than soil microclimate factors (e.g. soil temperature, moisture). The three sites were either annual CO2 sources (NEP<0) to the atmosphere or CO2 neutral, with strongest annual CO2 sources (-44.1±7.0 g C m-2) at the site with most shrubs. Overall this study suggests that shrubs tundra carbon balance will change with shrub expansion and that shrub ecosystems in the Arctic currently act as annual carbon sources or neutral to the atmospheric CO2 and further shrub expansion might strengthen the CO2 emissions, causing a positive feedback to the warming climate. Author Keywords: arctic tundra, carbon exchange, climate change, photosynthetic capacity, shrub expansion, soil respiration
Elemental Variation in Daphnia
Environmental variation can affect consumer trait expression and alter ecological and evolutionary dynamics in natural populations. However, although dietary nutrient content can vary by an order of magnitude in natural ecosystems, intra-specific differences in consumer responses to food quality have not been thoroughly investigated. Therefore, the purpose of my dissertation was to examine the influence of dietary nutrition and other environmental factors on consumer phenotypic variation using the freshwater cladoceran Daphnia. I conducted a series of complementary laboratory and field studies where I examined the effects of dietary phosphorus (P) content and additional biological/environmental variables (multi-elemental limitation, genetic variation, and temperature) on daphnid life-history, biochemistry, body elemental composition, and population growth. In general, phenotypic expression within a species varied significantly in response to all experimental variables, but the relative influence of each was highly context dependent. In my first chapter, I found that dietary P content and environmental calcium (Ca) concentrations both altered Daphnia body Ca:P ratios and growth rates of individuals and affected intrinsic rates of increase at the population level. However, food quality appeared to have a much larger effect on trait expression, and body Ca:P ratios were highly sensitive to other forms of dietary nutrient limitation. Next, I documented significant quantitative genetic variation and phenotypic plasticity in daphnid P content, growth, and P use efficiency of field collected animals grown across dietary P gradients. Trait expression was also influenced by genotype X diet interactions suggesting that consumer responses to dietary nutrient limitation can be heritable and may be adaptive in different nutrient environments. Finally, I found that temperature appeared to override food quality effects and decouple P metabolism in natural Daphnia populations, but total biomass production was affected by both dietary P content and temperature, depending on the nutrient content of the lake. Overall, my dissertation shows that consumer responses to nutrient limitation can vary significantly within a species and that changes in trait expression may be modified by other environmental variables. These results should be incorporated into existing stoichiometric models and used to investigate the eco-evolutionary consequences of consumer phenotypic variation in response to nutritional stress. Author Keywords: ecological stoichiometry, evolution, life-history, nutrient limitation, nutrient metabolism, zooplankton
Anarchist Periodical Press in the United States
This dissertation focuses on the English-language anarchist periodical press in the United States in the 1890s and early 1900s. Each of the three chapters of this dissertation examines one anarchist paper and its coverage of a specific issue. The first chapter focuses on Prison Blossoms, which was started by Alexander Berkman, Carl Nold, and Henry Bauer and written and circulated in the Western Penitentiary of Pennsylvania, and its engagement with Alexander Berkman's attempt to assassinate Henry Clay Frick. The second chapter examines Free Society, a weekly edited primarily by Abraham Isaak, and its contributors' writings on the assassination of President William McKinley by self-described anarchist Leon Czolgosz. Finally, the third chapter focuses on The Demonstrator, specifically its first volume which was edited by James F. Morton Jr. from the intentional community of Home, Washington, and the paper's work in supporting John Turner, the first anarchist targeted for deportation under the Immigration Act of 1903. Drawing upon critical discourse analysis, this dissertation incorporates examination of the context in which these papers were written (particularly the immediate concerns to which the papers' authors responded), the form and generic conventions of the anarchist press, including the approaches of the papers' respective editors, and the arguments advanced by their authors. It pays particular attention to the intertextuality of the anarchist press -- the ways in which those writing in anarchist papers addressed one another both within and across periodicals, generating anarchist thought through conversation and debate and enacting their anarchist ideals in the practice of publishing. This dissertation demonstrates that the anarchist periodical press, an element of anarchist history that has received little attention, offers important insights: it details how anarchists immediately responded to important issues of their time, and reveals the ways in which the emergence of anarchism was itself a collective effort, emerging from conversation, debate, and disagreement about how best to create radical change and what that change should look like. Author Keywords: anarchism, anarchist periodicals, critical discourse analysis, Free Society, Prison Blossoms, The Demonstrator
Nutrient Metabolism of an Aquatic Invertebrate and its Importance to Ecology
Aquatic consumers frequently face nutritional limitation, caused in part, by imbalances between the nutrients supplied by primary producers and the metabolic demands of the consumers. These nutritional imbalances alter many ecological processes including consumer life-history traits, population dynamics, and food web properties. Given the important ecological role of organismal nutrition, there is a need to have precise and specific indicators of nutritional stress in animals. Despite this need, current methods used to study nutrition are unable to distinguish between different types of nutritional limitation. Here I studied nutritional metabolism in the freshwater zooplankter, Daphnia. A greater understanding of nutritional metabolism would allow for the development of dietary bio-indicators that could improve the study of the nutritional ecology of animal consumers. Specifically, I addressed the question: What affects the biochemical composition of a generalist aquatic consumer? My overall hypothesis was that the quantity and quality of the diet affects the biochemical composition in a nutrient specific manner. To test this hypothesis, I examined various response variables involved in nutrient metabolism such as alkaline phosphatase activity, whole metabolome, and free amino acid composition. For each response variable, I grew Daphnia under various nutritional stressors and determined if responses are nutrient specific or are a general stress response. I found the current method of measuring alkaline phosphatase was not a phosphorus specific indicator, as activity increased in all nutrient stressed treatments. Analyzing the whole metabolome resulted in nutritional stressors being separated in multivariate space, with many identified metabolites being significantly different from nutrient rich Daphnia. Upon further examination the daphnids free amino acids profiles are caused by differences between the supply of amino acids from the algae and the demand within the Daphnia. These differences in supply and demand resulted in the ability to classify the nutritional status of Daphnia with the use of discriminant analysis, a classification multivariate model. In addition to a deeper understanding and advanced knowledge of the physiological changes caused by nutrient limitation, this research has provided strong evidence for the application of nutritional biomarkers/profiles to identified the nutritional status of Daphnia. Author Keywords: Bio-indictor, Ecological stoichiometry, Metabolism, Nutritional limitation, Nutritional status
Size and fluorescence properties of allochthonous dissolved organic matter
Dissolved organic matter (DOM) is a mixture of molecules with dynamic structure and composition that are ubiquitous in aquatic systems. DOM has several important functions in both natural and engineered systems, such as supporting microorganisms, governing the toxicity of metals and other pollutants, and controlling the fate of dissolved carbon. The structure and composition of DOM determine its reactivity, and hence its effectiveness in these ecosystem functions. While the structure, composition, and reactivity of riverine and marine DOM have been previously investigated, those of allochthonous DOM collected prior to exposure to microbes and sunlight have received scant attention. The following dissertation constitutes the first in-depth study of the structure, composition, and reactivity of allochthonous DOM at its point of origin (i.e. leaf leachates, LLDOM), as detected by measuring its size and optical properties. Concomitantly, novel chemometric methods were developed to interpret size-resolved data obtained using asymmetrical flow field-flow fractionation, including spectral deconvolution and the application of machine learning algorithms such as self-organizing maps to fluorescence data using a dataset of more than 1000 fluorescence excitation-emission matrices. The size and fluorescence properties of LLDOM are highly distinct. Indeed, LLDOM was correctly classified as one of 13 species/sources with 92.5% accuracy based on its fluorescence composition, and LLDOM was distinguished from riverine DOM sampled from eight different rivers with 98.3% accuracy. Additionally, both fluorescence and size properties were effective conservative tracers of DOC contribution in pH-controlled mixtures of leaf leachates and riverine DOM over two weeks. However, the structure of LLDOM responded differently to pH changes for leaves/needles from different tree species, and for older needles. Structural changes were non-reversible. Copper-binding strength (log K) differed for the different fluorescent components of DOM in a single allochthonous source by more than an order of magnitude (4.73 compared to 6.11). Biotransformation preferentially removed protein/polyphenol-like fluorescence and altered copper-binding parameters: log K increased from 4.7 to 5.5 for one fluorescent component measured by fluorescence quenching, but decreased from 7.2 to 5.8 for the overall DOM, as measured using voltammetry. The complexing capacity of DOM increased in response to biotransformation for both fluorescent and total DOM. The relationship between fluorescence and size properties was consistent for fresh allochthonous DOM, but differed in aged material. Since the size and fluorescence properties of LLDOM are strikingly different from those of riverine DOM, deeper investigation into transformative pathways and mixing processes is required to elucidate the contribution of riparian plant species to DOM signatures in rivers. Author Keywords: Analytical chemistry, Chemometrics, Dissolved organic matter (DOM), Field-flow fractionation, Fluorescence spectroscopy, Parallel factor analysis (PARAFAC)
methodological framework for the assessment and monitoring of forest degradation under the REDD+ programme based on remote sensing techniques and field data
In this thesis, a methodological framework for the assessment and monitoring of forest degradation based on remote sensing techniques and field data, as part of the REDD+ programme, is presented. The framework intends to support the implementation of a national Monitoring, Verification and Report (MRV) system in developing countries. The framework proposed an operational definition of forest degradation and a set of indicators, namely Canopy Cover (CC), Aboveground Biomass (AGB) and Net Primary Productivity (NPP), derived from remote sensing data. The applicability of the framework is tested in a sub-deciduous tropical forest in the Southeast of Mexico. The results from the application of the methodological framework showed that the higher rates of forest degradation, 1596-2865 ha·year-1, occur in areas with high population density. Estimations of aboveground biomass in these degraded areas span from 1 to 24 Mg·ha-1, with a rate of carbon fixation ranging from 130 to 246 gC·m2·year. The results also showed that 43 % of the forests of the study area remain with no evident signs of degradation, as detected by the indicators selected, during the period evaluated. The integration of the different elements conforming the methodological framework for the assessment and monitoring of forest degradation enabled the identification of areas that maintain a stable condition and areas that change over the period evaluated. The methodology outlined in this thesis also allows for the identification of the temporal and spatial distributions of forest degradation based on the indicators selected, and it is expected to serve as the basis for operations of the REDD+ programme with the appropriate adaptations to the area in turn. Author Keywords: Forest degradation, Monitoring, REDD+, Remote Sensing, Tropical forest
effects of parasitism on consumer-driven nutrient recycling
Daphnia are keystone consumers in many pelagic ecosystems because of their central role in nutrient cycling. Daphnia are also frequently infected, and the parasites causing these infections may rival their hosts in their ability to regulate ecosystem processes. Therefore, parasitic exploitation of Daphnia may alter nutrient cycling in pelagic systems. This thesis integrates existing knowledge regarding the exploitation of Daphnia magna by 2 endoparasites to predict parasite-induced changes in the nutrient cycling of infected hosts and ecosystems. In chapter 1, I I contextualizing the integration of these themes by reviewing the development of the fields of elemental stoichiometry and parasitology. In chapter 2, we show how the bacterial parasite, Pasteuria ramosa, increased the nitrogen (N) and phosphorus (P) release rates of D. magna fed P-poor diets. We used a mass-balance nutrient release model to show that parasite-induced changes in host nutrient accumulation rates and diet-specific changes in host ingestion rates were responsible for the accelerated nutrient release rates that we observed. In chapter 3, we extended our examination of the nutrient mass balance of infected D. magna to include another parasite, the microsporidian H. tvaerminnensis. We found differences in the effects of these two parasites on host nutrient use as well as support for the hypothesis that parasite-induced changes in Daphnia N release are caused by the effects of infection on Daphnia fecundity. In chapter 4, we examined the relationship between P concentrations and the presence and prevalence of H. tvaerminnensis in rock pools along the Baltic Sea. We found that particulate P concentrations were negatively associated with the prevalence of this parasite, a result that is consistent with the increase in P sequestration of H. tvaerminnensis-infected Daphnia that we observed in chapter 3. I discuss the potential implications of the work presented in chapters 2-4 for other parasite-host systems and ecosystems in chapter 5. Overall, the research presented here suggests that parasite-induced changes in host nutrient use may affect the availability of nutrients in the surrounding environment, and the magnitude of this effect may be linked to parasite-induced reductions in fecundity for many invertebrate hosts. Author Keywords: consumer, ingestion rates, mass-balance, nutrient-recycling, parasitism, phosphorus
Lipid-derived Thermoplastic Poly(ester urethane)s
Thermoplastic poly(ester urethane)s (TPEU)s derived from vegetable oils possess inferior physical properties compared to their entirely petroleum-based counterparts due to the structural limitations and lower reactivity of the precursor lipid-derived monomers. The present work shows that high molecular weight of TPEUs with enhanced performance can be obtained from lipid-derived monomers via (i) the synthesis of polyester diols with controlled molecular weights, (ii) the tuning of the functional group stoichiometry of the polyester diols and the diisocyanate during polymerization, (iii) the degree of polymerization (iv) the control of the hard segment hydrogen bond density and distribution via the use of a chain extender and (v) different polymerization protocols. Solvent-resistant TPEUs with high molecular weight displaying polyethylene-like behavior and controlled polyester and urethane segment phase separation were obtained. Structure-property investigations revealed that the thermal transition temperatures and tensile properties increased and eventually plateaued with increasing molecular weight. Novel segmented TPEUs possessed high phase separation and showed elastomeric properties such as low modulus and high elongation analogous to rubber. The response of the structurally optimized TPEUs to environmental degradation was also established by subjecting the TPEUs to hydrothermal ageing. TPEUs exhibited thermal and mechanical properties that were comparable to commercially available entirely petroleum-based counterparts, and that could be tuned in order to achieve enhanced physical properties and controlled degradability. Author Keywords: Hydrothermal degradation, Molecular weight control, Polyester diols, Renewable resources, Structure-property relationships, Thermoplastic poly(ester urethane)s
Lacanian Realism
The overarching argument of this manuscript concerns Lacanian Realism, that is, the Lacanian theory of the Real. Initially, my argument may seem quite modest: I claim that Lacanians have been preoccupied with a particular modality of the Real, one that insists on interrupting, limiting, or exceeding the various orders or agencies of the human mind. The implications of such a position are worth considering. For example, one must, as a consequence of holding this position, bracket questions pertaining to Things outside of the Symbolic and Imaginary psychical systems. Careful study shall expose the extent to which this position has infuenced each of the major felds inspired by Jacques Lacan: clinical psychoanalysis, radical political philosophy, and mathematics or topology. My task has been to explore the consequent occlusion which psychoanalysis has suffered in each of these three felds and to tease out the possibility of a return to the Real. Author Keywords: Alain Badiou, Anarchism, Hysteria, Jacques Lacan, psychoanalysis, Slavoj Zizek
Phylogeography and Genetic Structuring of Moose (Alces alces) Populations in Ontario, Canada
Moose are an iconic species, known for their large size and impressive antlers. Eight subspecies are classified in circumpolar regions of the planet - four in North America. Two subspecies are similar in shape and size, the north-western moose (Alces alces andersoni) and the eastern moose (Alces alces americana). It was previously believed that these two subspecies meet in northern Ontario. Earlier genetic population studies used a small number of samples from Ontario, primarily in broad studies covering all of North America. A comprehensive genetic study of moose populations in Ontario has not previously been conducted. We examined the genetic diversity and population structure at 10 polymorphic loci using 776 samples from Ontario, as well as outgroups from representative populations – Manitoba/Cape Breton, representing A. a. andersoni, and New Brunswick/Nova Scotia, representing A. a. americana. Results indicated three genetic populations in the province, in north-western Ontario, north-eastern Ontario and south-central Ontario. RST values, compared against both FST and Jost’s D values for phylogenetic analyses, indicated no phylogenetic pattern which suggests no subspeciation present in the province. Population movement patterns in Ontario were studied. Gene flow was estimated using genetic and spatial data. Isolation by distance was only seen within the first distance class of 100 kilometres and then not seen again at further distances, indicating that moose display philopatry. There were very few migrants travelling across the province, with a greater number moving gradually north and west, towards better habitat and food sources. A forensic database in the form of an allele frequency table was created. Three loci showed very low levels of heterozygosity across all three populations. Probability of identity was calculated for the three populations and quantified. Samples with known geographic origins were run against the database to test for sensitivity, with identification of origin occurring at an accuracy level between 87 and 100%. Within Ontario, there are not two different subspecies, as previously believed, but two different populations of the same subspecies meeting in northern Ontario. The genetic data does not support previous research performed in Ontario. The sample sizes in our research also provide a more comprehensive view of the entire province not seen in any previous studies. The comprehensive research enabled the building of a reliable forensic database that can be used for both management and forensic purposes for the entire province. Author Keywords: Alces alces, Genetic Diversity, Moose, Ontario, Phylogeography, Subspecies
Time, Being, and the Image
The three projects that make up this dissertation try to articulate an ontological idea of art; which is to say, they all approach art, or the imagination (as in project two), from the standpoint of a philosophical question concerning the sense of being. The ontological question is elaborated in terms of a theory of the spatial-temporal structure of the aesthetic or sensible realm. This kind of ontology contrasts with a more traditional metaphysical one, where the sense of being is sought within the purely intelligible realm, a realm that transcends the sensible. In projects one and two, the contrast is developed in terms of the Nietzschean/Heideggerian critique of metaphysics, and through the work of Jean-Luc Nancy, who appropriates this critique. In project three, it is developed in terms of Bergson and Deleuze’s critique of objective time, or of any attempt to define being and time in terms of what is static and unchanging. Art is central for the ontology at stake here, and the ontology is one of art, because it is a matter of questioning the spatial-temporal being of the sensible, and not the being of the purely intelligible; and because art (as I try to show) is itself essentially concerned with revealing this ontological dimension of the sensible. Author Keywords: Aesthetics, Art, Being, Fragment, Image, Time
Pedagogy of Renaturalization
This three-part dissertation will consider both theoretical and practical implications that Baruch Spinoza's (1632-1677) immanent philosophical system holds for developing a contemporary “pedagogy of renaturalization.” One of the intents of this thesis is to draw out how “intellectual slut shaming” is a naturalized part of neoliberal subjectivity. In chapter one, we will make the case that the Cartesian and neoliberal subjects share several parallel structures, including mind-body dualism. We will look at how Spinoza’s work supplies us with a powerful critique and expansion of the Cartesian subject. The intent here is to explore how we might apply a similar critique to the neoliberal subject and construct a more joyful subject that resists guilt, shame, and self-hatred. In chapter two, we will explore how Spinoza’s method of affirmation can give us a process to engage ourselves in a pedagogy of renaturalizing ourselves; in other words, to engage in the radical self-reflexivity of understanding ourselves as a part of Spinoza's Nature in order to better affect becomings of ethical joy. We will also examine the challenges and criticism of the affirmative method, and how paradoxically these criticisms serve to reinforce intellectual slut shaming. Chapter three will explore the potential of the methodology of autoethnography and the development of what we are calling “auto-ethology” as a way to put such an affirmative method into practice. By reviewing the dissertation as a whole, we will show how it has been an engagement with Spinozist radical self-reflexivity all along and a performance of auto-ethology. Author Keywords: autoethnography, Baruch Spinoza, Cartesian dualism, critical pedagogy, intellectual slut shaming, neoliberal subject


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